Browse of TCMCG056C16717 protein

CDS

Accession Number	TCMCG056C16717
gbkey	CDS
Protein Id	XP_031391658.1
Location	complement(join(5273245..5273337,5273452..5273625,5273880..5274020,5274383..5274490,5274664..5274799,5274937..5275008,5275083..5275191,5275377..5275496,5275652..5275970,5276138..5276206,5276844..5277169,5277277..5277353,5277754..5277938,5278052..5278329,5278560..5278722,5278819..5279378,5279490..5279679,5279798..5279980,5280167..5280287,5280659..5280756,5280842..5280943,5282182..5282264,5282536..5282693,5282929..5282989,5283463..5283733,5283822..5283954,5284222..5284442))
Gene	LOC116203846
GeneID	116203846
Organism	Punica granatum

Protein

Length	1516aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA580467
db_source	XM_031535798.1
Definition	nuclear pore complex protein NUP160 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category	UY
Description	Nuclear pore complex protein NUP160 homolog
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14303        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0006403        [VIEW IN EMBL-EBI] GO:0006405        [VIEW IN EMBL-EBI] GO:0006406        [VIEW IN EMBL-EBI] GO:0006611        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006886        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0008104        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009409        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009733        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0015031        [VIEW IN EMBL-EBI] GO:0015833        [VIEW IN EMBL-EBI] GO:0015931        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016973        [VIEW IN EMBL-EBI] GO:0031090        [VIEW IN EMBL-EBI] GO:0031503        [VIEW IN EMBL-EBI] GO:0031965        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033036        [VIEW IN EMBL-EBI] GO:0034613        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042886        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045184        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0050657        [VIEW IN EMBL-EBI] GO:0050658        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051028        [VIEW IN EMBL-EBI] GO:0051168        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051236        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0070727        [VIEW IN EMBL-EBI] GO:0071166        [VIEW IN EMBL-EBI] GO:0071426        [VIEW IN EMBL-EBI] GO:0071427        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACATGGGAACTAAAGTGAAGCTCGTGGGAACGGAAGTCCCCATCCCCGGCAGCGACTCTGTCAACTGGATTGAGCTCACCGTCCCGTCTTCAGTCTCCGCTGCTGCACCAGCTGCTGTGTCTAGTGCTGCTTCAGCCAGAGAGTCCTTTGCTCCTCCTACAGAGGATCGTGCTTCGTGTTCGGTGATAGGCGATCCAATTCAGTCCTACTTCATCTGGAGAATAAACAAGAGCTCGCCTCATGTCCTGGAACTGCTAGAATTCTCTGCTGACAAGGAATTCCCTCGCAATGGTCTCCAAATTGTGTTTCCAGATGCCCTTTCTCCTTTCGCTTTTATCTGCCTCGACAAATCTAATCATCAAGATGGAAGCCCGTATTTGCTCTATGTCTTGACGGTCTCTGGAGTTGCCTACCTGCTCCAACTTAAAAGTGTTGATACTTACGTACTATCTTCTTCTTCCATCTTACCGGCAAATGAGATAACTGAGTTTGATGTGCGGTTATACGTAAGTCAAGGTGTAATAACGAGTGTTGCAGCAAGTATGGGTTTATTTTTGGTTGGGACAGATTCAGGGTCTGTTATCTGCTTCAAGCTTGGCAGTCTTCATCGCACTAGTCCGGGTTTTCACTTTGAGCTTCGAGATGATACTGGAATTGGCCGACTATGGGGTTTTGTGTCAAGGGGTAAGATGGTTGGGGCAGTTCAGGATTTGTTAATAGCTGAGACGCTTGGCAGACCACTTGCTTTTGTTCTCCATTCTGATGGAACAATTAGAGTGTGGGATCTTTTGGATTGTAATAGGGTTCTAAACCACATGGTGAATCCCCATTCATTGGGAGGACTATTCAAAAGATTGTGGGTTGGTCAAGCTAATCGTTCAAGAAACATAATTCCTTTGGTGATCCTACACAAACAAAATATGGAAGATACCATGGAGACAATCTCTGTATATAAAATTCAGTTTGACTTTGGGGACAAGGTCATTTTCTCAATGAATTCTTCAGTGCAAAGTATTCCTTTGGAGGGCGGATGTGTGGATGTTCAACTTTCTGAGCATAACATATTGATTCTAAAAGACAGCGGATTGGTGTCACATAACATGTTGCACACAAATGCTGATGTGGAGGAATCGCAGTGTTATGCTTTGCAGGAAGAATTTGTTGCTGACCAGTTATATCAAAGTTCTGAGCAATTTCCAGATGATCTACTTTGGATTACCCAGTCTATGTTTTCATCCGTGAAGGATCAGACTATTGCATTTGTTTCTTCAGTCTTCTTAAGAAAGCTGCTCCATCCAGGCATTTTTCATGATGGTGTTTTCCAAATGACCATGCTGGACTACAACAGGCACTTGGCTTATTCTGATTTGCGAAATATGACTGTTGATGGGCTTAAAAAGGAGATTCTTTCGCTGATTGAGCACGAGGTCAATCAAACTCCACTCTCGGCATTCTATCGTTGGAAAGTTTTCTGTAATCGCTATTTTGATCACTGGTGCAAGAGCAATGCCCCACTAGGTTTGCTGCTTCAGCCTCCTGGTGACGCCATTGTTTTAATCCGCAAGAGTTCAGTGTCGTTGTTCCGATCAATGGAGAAAATTGAGCTACTTGTTTCTGGTTCCGATGAGGTTAGTGATGTTATAAATTTTGGGTTGAGCTCCTCTGATGATAAATTTGGGTGGGAGATCCTCTTGGAAGTTCTTGGCTGTGTAAATTGCATAAGTCAACAACTGGGGAAGACAGCTTCGGCCGTAATATACGAGTTACTCATGACTACGCCCATGATAAGTCCTGATGATTTTCTCCCCTGCTTATTGAAGACTTTAGAAACTGGATATAGTTCTTCGGTGGCTGCCTTCGACTCACGGATTGACATAGTGCTGGAGAAGGAATTAGTGGATCACAAGAAAATTAGGAAATTCTCTGCTCATATGATGTTAGCTCTTCATAATTTGAGCAGTAAAGCGGCAGCATGGGGTAGAGTTTTGGAAGTCATCGAGGGCTACATTAATTTTCTTGTCCCACAGAAGACCATACAGAAGTTTGACACTGAGAGGTCTGTAGATATGAACACTGCGGTTTTAGTCCAGTCTACTTCTCAAGTTGCAAGGGTGATGTTTGAGTCTGCAACCGACATTCATCTTTTCCTTAGTTATCTTCTTCATATTGGCGGGCAGATCCATATGTCACATGATGACGTTTCCAGAATACAGTTTGAATTGGTCCCAATGTTACAAGAAGTTATTTCTGAGTGGCTCATCATTCAATTTTTTGCTTCCATGCCATCTGAAGTTCCTGCAGTTGAAGATTTCAGCTATCAACTATCATCTCTAAAGATTGACAGCAGTATTGACAAGAGATCATCGAAGGATAGGCAAGGAAAACGCGATTTCACGTTGGCATATTTACTCCTGTCAAATGGTCTTAACTCCTCTGAAGAGCATGATAAACTAGGTCACAGATATCTTCCTGGCCCACAAATTATTTTAAGTGCTGCAAGGAATTTTATTAGCTGGATTATCTGGGGGAGAGCTGGAGAGGAATCTTCTATTTTCTTGAGCCATACCTCCGAGCTTGCAATGATCCTTATTAGAAATGGGCAATATAATGCTGCTGAGCTCCTAATTGGCTTAGTGGAGTCTCATGCTCGGAAGGAATATATATCTAGGAGTTTACAGGACGCCAAAGGGCAATGGTGCATGCTCCATCATCTTCTTGGCTGTAGCTTGCTTGCTCAAGCCCGGGGCTTACATGGAACTGTGAAAGAAACTAAAGTCAGTGATGCAGTTCGCTGTTTCTTCCGAGCGTCATCTGGGGAAGGTGCCTCCCAGGCTTTGCAGAATTTATCTGATGGAACTGGATTTCCCCAGCTTGGACTATATAATGAATTACCAGCTGCATGGAAGCTTCATTATTATCAGTGGGCAATGCAAACATTTGAGCAGCATAACATTAGTGAAGGTGCTTGCCAGTTTGCTCTTGCTGCACTTGAGCAGGTTGATGAAGCTCTAAGTAGCAACGAAGCTCCTGATGAGAGCGCAACTACTATCAGAGGACGGCTTTGGGCAAATGTCTTCAAGTTTACTTTAGATCTTAACCACTATTATGATGCATATTGTTCAATCATTTCAAATCCCGATGAGGAGAGCAAATACATATGCTTGAGGCGTTTCATAATCGTTCTTTATGAACGTGGTGCCTTAAAGAATCTTTGTAACGGTCAACTCCCCTTTATTAGTTTGACAGAAAAGGTTGAGCTTGAACTTTCCTGGAAGGCTGAACGCTCAGATATCATGCTGAAGCAAAACCCTTATAAATTGCTTTATGCATTTGAAATGCACCGTCAGAATTGGCGAAGAGCTGCCAGTTATATGTATCGATTTACATCTCGTTTGAGAAATGAAGTTGTGCTAAAAGATAGTCAGAAGTCTTCTGTAGCAATTCAAGAAAGACTAAATGGGCTCTCTGCTGCTATCAATGCGCTGCATCTTGTTCATCCTCTACATGCATGGATTGATCCTCTTCTAGAAGAAATTCCGACAAAGAACGCGCATTATCCCAATAAAAGGGCTAAAACAACAGCTGGAGAACAGACCACAGAGAATGGTATTCAGCCTCATGGCTATCTTGGTATTGCGAAACTTGATAATGAATATATCTTGACTTCAGCTGAATATTTGCTCTGCCTGGCCAACATCAAATGGTCATATTCTGATGCATCAGCACTTCCCCCAGAATTAGTCGACCTCTTGGTCGAGATGGATTTATATGACATGGCTTTCACTGTCCTCTTGAAATTCTGCAAGGATACCGGACTAAAAAGGGAGCTGGAGAGTGTGTTCCGGGCGATGTCATTGAAATGTTGCCCCAATACTGTGGGTTCAACATTGACTGGGAACGATTTGAGAACACAACCTCTTCTGTTGACATCATCAAAGAATGAAGCAACCCAGCCTGGTTTACTTGAATTGGGTGGCCCGATGAATCAAGTCAGGGGAAATAGCAGTTGGGAAAATCTTGAGCTTTACCTTGGTAAATACAAAAATCTTCACGCAAGACTGCCTGTTGTCGTCGCTGAAACACTCCTTCATGCCGATTCTGAAATAGAACTACCACTTTGGTTGGTTCAAATGTTCAAGAGTGGGGGAAGTGAGCGGAGATGGGGTATGACTGGTCAGGAATCGAATCCCGCGTCCCTGTTTCAGCTTTACGTTGATCATGGGCGTTTCACCGAAGCCACAAATCTGTTGCTAGAGTATATCGATTCATTCAAATCAGTGAGACCAGCAGAGGTAATTTTCCGCAAAAGGCCATCTTCGGTTTGGTTTTCATACACAGCAATTGAGAGACTTTGGTGCCAACTAGAGCGATCTATAGCCTTGGGCCACATGGTTGAGCAGAGCAGGAAGCTGCAGAGTTTGTTAAGCGATGCTCTGTCGGGCCATCTAAAGCAGCTGAAGGTGGATTCTGAGGATGCGGTATCATTGTTGACCGAGAGAAAAGACTTAACAGTGCTTGAAACACAGAATTTTCACTACAGGCTGTAG

Protein:   MDMGTKVKLVGTEVPIPGSDSVNWIELTVPSSVSAAAPAAVSSAASARESFAPPTEDRASCSVIGDPIQSYFIWRINKSSPHVLELLEFSADKEFPRNGLQIVFPDALSPFAFICLDKSNHQDGSPYLLYVLTVSGVAYLLQLKSVDTYVLSSSSILPANEITEFDVRLYVSQGVITSVAASMGLFLVGTDSGSVICFKLGSLHRTSPGFHFELRDDTGIGRLWGFVSRGKMVGAVQDLLIAETLGRPLAFVLHSDGTIRVWDLLDCNRVLNHMVNPHSLGGLFKRLWVGQANRSRNIIPLVILHKQNMEDTMETISVYKIQFDFGDKVIFSMNSSVQSIPLEGGCVDVQLSEHNILILKDSGLVSHNMLHTNADVEESQCYALQEEFVADQLYQSSEQFPDDLLWITQSMFSSVKDQTIAFVSSVFLRKLLHPGIFHDGVFQMTMLDYNRHLAYSDLRNMTVDGLKKEILSLIEHEVNQTPLSAFYRWKVFCNRYFDHWCKSNAPLGLLLQPPGDAIVLIRKSSVSLFRSMEKIELLVSGSDEVSDVINFGLSSSDDKFGWEILLEVLGCVNCISQQLGKTASAVIYELLMTTPMISPDDFLPCLLKTLETGYSSSVAAFDSRIDIVLEKELVDHKKIRKFSAHMMLALHNLSSKAAAWGRVLEVIEGYINFLVPQKTIQKFDTERSVDMNTAVLVQSTSQVARVMFESATDIHLFLSYLLHIGGQIHMSHDDVSRIQFELVPMLQEVISEWLIIQFFASMPSEVPAVEDFSYQLSSLKIDSSIDKRSSKDRQGKRDFTLAYLLLSNGLNSSEEHDKLGHRYLPGPQIILSAARNFISWIIWGRAGEESSIFLSHTSELAMILIRNGQYNAAELLIGLVESHARKEYISRSLQDAKGQWCMLHHLLGCSLLAQARGLHGTVKETKVSDAVRCFFRASSGEGASQALQNLSDGTGFPQLGLYNELPAAWKLHYYQWAMQTFEQHNISEGACQFALAALEQVDEALSSNEAPDESATTIRGRLWANVFKFTLDLNHYYDAYCSIISNPDEESKYICLRRFIIVLYERGALKNLCNGQLPFISLTEKVELELSWKAERSDIMLKQNPYKLLYAFEMHRQNWRRAASYMYRFTSRLRNEVVLKDSQKSSVAIQERLNGLSAAINALHLVHPLHAWIDPLLEEIPTKNAHYPNKRAKTTAGEQTTENGIQPHGYLGIAKLDNEYILTSAEYLLCLANIKWSYSDASALPPELVDLLVEMDLYDMAFTVLLKFCKDTGLKRELESVFRAMSLKCCPNTVGSTLTGNDLRTQPLLLTSSKNEATQPGLLELGGPMNQVRGNSSWENLELYLGKYKNLHARLPVVVAETLLHADSEIELPLWLVQMFKSGGSERRWGMTGQESNPASLFQLYVDHGRFTEATNLLLEYIDSFKSVRPAEVIFRKRPSSVWFSYTAIERLWCQLERSIALGHMVEQSRKLQSLLSDALSGHLKQLKVDSEDAVSLLTERKDLTVLETQNFHYRL